Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015820241.1_cds_XP_016500315.1_14155
CDS Infomation	[gene=LOC107818778] [db_xref=GeneID:107818778] [protein=DNA mismatch repair protein PMS1-like] [protein_id=XP_016500315.1] [location=complement(join(10809..10940,11274..11455,11805..11908,16152..16217,17695..17768,17921..17989,18992..19118,19205..19479,19633..20865,21463..21696))] [gbkey=CDS]
Sequence	ATGGACAGAGGACCAGCAGCTTCACCATCGACTATAAAGCCCATAAACAAGGGCGTCGTG CATAGAATTTGTGCTGGTCAAGTTATTTTGGACCTTTCCTCCGCCGTCAAGGAGTTGGTT GAGAACAGCTTGGACGCCGGCGCCACCAGCATCGAGGTTTCGCTCAAAGACTATGGCGCT GAATCCTTCCAGGTTATCGACAACGGTTGTGGCATCTCGCCTCACAATTTCAAGGCCTAT GCTGTTATTTCTAAGGGAGTCAGAATAGTTTGCACCAACACAGCTGTAAGAAATGCAAAG TCTGTAGTTCTGAAGACTCAGGGAAGTGGATCCCTGAAAGATAACATCATAACAGTATTT GGTATGAGTACCTTTACTTGTCTGGAGCCTCTTAAAGTATGTACTTCTGATGGTTGCACA GTTGAAGGATTCATTTCCAAGCCTGGTTATGGTAGTGGACGCAATATAGGGGATCGACAA TACTTTTTTGTGAATGGACGGCCAGTAGATATGCCAAAAGTTGGCAAGCTTGTCAATGAG TTGTACAGAGGTGCAAACTCTCGACAATATCCCATTGCAATCATGGACTTCACGATCCCA CCCAGAGCATTTGATGTCAACGTAACTCCTGATAAAAGAAAAATATTTCTGTCCGATGAA GGCTCCATATTGCATTCTTTGAGAGAAGCTTTAGAGAAGATATACTCATCAAATCATGCT AGTTATGCTGTTAATAGTTTCCAAGAGGTTTTTGAAGAAAAACATACATCCACTCATTCC CAACTCGAGGCCTTTCAGTTTCAATCCAAGCAATTATTGTCAGATAGCGATGATACTCAG GAAGGTGACTGCATTGGGGAGCTACATAAAGATGGCCACTATCTCAAAAAACCTCTAAAG GAATTAAAAGATACTTCTGTCACGGGCATGTTAAATGATGGAAACAGGTCAACAGAGAAA CACTTCAGTCTTCGATTCCATGGAAAGAAGAAAGACAATCGCAGTTCCAGAAGTCCCTGG AAGGAAGTCGGAGGTCTGATTACTGCTGATGGACAAGCACTCACCCCAGGATCAAAAGAT AAAAGCTGTATCGATAATGCACATTATGTGGATCATGCAACCATTGTCCAGTCATCACTC ACCAAATTTGTTACAGTAAATAAGAGAAAGCACGAGAGTATGGGTACTGCATTATCTGAG GTACCTCTCCTGAGAAATAGATCGACTGTATGTCCTTCAGGAGAAGACAATTATTTGAAG GATACGACATCCTTAAGATCTCCAGATAATCCAGTTAAGGCTGATAAGTGTGATGAATTA ACCAGTGATAAGTCTGGATCTTCCAAGTTCACAAAGATAGATAGATTTCTTCATCAAGTG AAGCAGTCAAGAACGGACACAGTCCTTGATCAAACAAATAATTTAATTCGGCCTGGAAAT AGTATACAAAATGGAAAATTTGAGGAGGAGCATGAGGTTCAAATGAACGAGTTATGTGTG ACTGAATCGGTGCTTGTTAATTCTACTTGCAACAACATTCACGATGTGTCAGAAAATATG GTAGATGCTGTTTCTTTTGAACAGCCTGCTAGTCTGACTTTGGATGCTCCTAAGGCTTCA TCTGATTTAAAGATTGGTTCGACATTGCAATTTAGTGTGAACGACCTCATATCAAGAAGG AAGCAGAGACTGTCAAGATTGCAACTCCTTAATCGTACATCTCAAAGAATGAAAACAAAA ATGGATTATGCTGCAGCTACCCTGGAGCTCACCGAATCAGAAAATGAAGTGGCCAAGGAA AAGGCTTTGATTGCTGCTACCAGTGAGCTGGAGAGACTTTTCAAGAAAGAAGATTTTACT AAAATGAAGGTGATTGGGCAATTCAATCTTGGATTCATTATAGGCAGGTTGGATGAGGAC CTTTTTATTATTGATCAGCATGCTGCAGACGAGAAGTATAATTTTGAGCGTCTGTCACAG TCAACTATCTTGAATCAGCAACCTTTGCTTCGGCCCTTGAAGATGGAGTTATCGCCTGAA GAAGAAATAGTTATTTCCATCCACAATGATACTTTTAGGAGAAATGGATTTCTATTGGAA GAGGATCTGCATGCTCCTCCAGGGCATCGATTTAAGCTAAAAGCAGTTCCCTTCAGCAAA AATATAACTTTTGGAGTCGCAGATGTGAAAGAACTCATTGCGATTCTTGCCGATAGTCAG GAAGAATGTTCCATGATGGGTACTTATAAAGACGATACTGCCAATTCACTATGTCCTCCT AGAGTTCGTGCAATGTTGGCATCACGTGCCTGCAAATCATCTATTGTTATTGGAGATCCA CTTGGGAGAAATGAGATGCAAAAGATACTTGACAATCTATCACGACTCAAGTCTCCGTGG AATTGTCCACATGGTAGACCAACAATGCGTCACTTGGTTGATCTGAGGACTGTACATAGA AGAATAGAAGCGGATGAGAATGAGACCGCCTTATAA

Peptide Sequence

PEP ID	XP_016500315.1
PEP Infomation	PREDICTED: DNA mismatch repair protein PMS1-like [Nicotiana tabacum]
Sequence	MDRGPAASPSTIKPINKGVVHRICAGQVILDLSSAVKELVENSLDAGATSIEVSLKDYGA ESFQVIDNGCGISPHNFKAYAVISKGVRIVCTNTAVRNAKSVVLKTQGSGSLKDNIITVF GMSTFTCLEPLKVCTSDGCTVEGFISKPGYGSGRNIGDRQYFFVNGRPVDMPKVGKLVNE LYRGANSRQYPIAIMDFTIPPRAFDVNVTPDKRKIFLSDEGSILHSLREALEKIYSSNHA SYAVNSFQEVFEEKHTSTHSQLEAFQFQSKQLLSDSDDTQEGDCIGELHKDGHYLKKPLK ELKDTSVTGMLNDGNRSTEKHFSLRFHGKKKDNRSSRSPWKEVGGLITADGQALTPGSKD KSCIDNAHYVDHATIVQSSLTKFVTVNKRKHESMGTALSEVPLLRNRSTVCPSGEDNYLK DTTSLRSPDNPVKADKCDELTSDKSGSSKFTKIDRFLHQVKQSRTDTVLDQTNNLIRPGN SIQNGKFEEEHEVQMNELCVTESVLVNSTCNNIHDVSENMVDAVSFEQPASLTLDAPKAS SDLKIGSTLQFSVNDLISRRKQRLSRLQLLNRTSQRMKTKMDYAAATLELTESENEVAKE KALIAATSELERLFKKEDFTKMKVIGQFNLGFIIGRLDEDLFIIDQHAADEKYNFERLSQ STILNQQPLLRPLKMELSPEEEIVISIHNDTFRRNGFLLEEDLHAPPGHRFKLKAVPFSK NITFGVADVKELIAILADSQEECSMMGTYKDDTANSLCPPRVRAMLASRACKSSIVIGDP LGRNEMQKILDNLSRLKSPWNCPHGRPTMRHLVDLRTVHRRIEADENETAL

Transcript Sequence

Gene sequence data has not been registered.